i have done it with the plotrix package.
First plot the graph. Then you can add the breaks with axis.break(axis, breakpos,style). There are some more parameters, check out ?break.axis.
Here is my example:
pdf("WHRboys.pdf")
qtplot(fitwhrm, per = c(3,10,25,50,75,90,97), pcol = 1, ylab = "WHR", xlab="Age (years)", pcex = 0.25, pch = 15, lwd = 2, tadj = 1, label = T, lcol.arg=colors, tcol=colors)
axis.break(1,7.7, style="slash", brw=0.012)
axis.break(2,0.643, style="slash", brw=0.012)
dev.off()
my personal notepad - for all the things I used to write on pieces of paper ( which where never seen again esp. when I needed them ) ...
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